BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003B01LP1|AL425064
(973 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1183 246 5e-65
>3x_Contig1183
Length = 3176
Score = 246 bits (117), Expect = 5e-65
Identities = 134/141 (95%), Gaps = 1/141 (0%)
Strand = Plus / Plus
Query: 1 atatagayctaaaatattgatataattaaccccgcagattcaaaggaatccgcggggaat 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2698 atatagatctaaaatattgatataattaaccccgcagattcaaaggaatccgcggggaat 2757
Query: 61 atatcattctcctcggctctcatcctttwaaagtaggtatgagagccgttattctaatta 120
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 2758 atatcattctcctcggctctcatcctacaaaagtagg-atgagagccgttattctaatta 2816
Query: 121 tyattattctaattatyatta 141
| |||||||||||||| ||||
Sbjct: 2817 ttattattctaattattatta 2837
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.46 0.722 1.37
Gapped
Lambda K H
1.46 0.722 1.37
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 67,288
Number of Sequences: 1807
Number of extensions: 67288
Number of successful extensions: 16887
Number of sequences better than 1.0e-20: 1
length of query: 973
length of database: 10,358,551
effective HSP length: 16
effective length of query: 957
effective length of database: 10,329,639
effective search space: 9885464523
effective search space used: 9885464523
T: 0
A: 40
X1: 5 (10.5 bits)
X2: 14 (29.5 bits)
S1: 11 (23.6 bits)
S2: 48 (101.6 bits)